Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPSATVAPVKRIPYAEASRALLRDSVLDAMRDLLLTRDWSAITLSDVARAAGISRQTIYNEFGSRQGLAQGYALRLADRLVDNVHASLDANVGNFYEAFLQGFRSFFAESAADPLVISLLTGVAKPDLLQLITTDSAPIITRASARLAPAFTDTWVATTDNDANVLSRAIVRLCLSYVSMPPEADHDVAADLARLITPFAERHGVINVP
1T56 Chain:A ((28-87))
--------------------------AILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAV----LLTLLDRVVNQADMAL-------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36323 for 353 contacts (-102.9/contact) +
2D Compatibility (PS) -6589 + (NN) -3110 + (LL) 10820
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: -42302.0 ( -119.84 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1T56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T56-query.scw
PDB file :
Tito_Scwrl_1T56.pdb
: