Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
1IU5 Chain:A ((3-51))
------YVCKICGYIYDEDAGDPDNGVSPGTKFEEIPDDWVCPICGAPKSEFEKL-----
General information:
TITO was launched using:
RESULT:
Template:
1IU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14268 for 284 contacts (-50.2/contact) +
2D Compatibility (PS) -5136 + (NN) -5410 + (LL) 896
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -28768.0 ( -101.30 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_1IU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IU5-query.scw
PDB file :
Tito_Scwrl_1IU5.pdb
: