Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWPAAAVDRVIKAYDVRGLVGEEIDESLVTDLGAAFARLMRTEDARP-VVIGHDMRDSSPSLADAFAAGVTGQGLDVVRVGLASTDQLYFASGLLDCP-GAMFTASHNPAAYNGIKMCRAAAKPVG--ADTGLTAIRDDLIAGVARYDGTP-GTIADQ-DVLVDYGAFLRSLV--DTSGLRPLRVAVDAGNGMAGHTAPAVLGVIDS-ITLLPSYFELDGSFPNHEANPLDPANLVDLQAYVRDTGADIGLAFDGDADRCFVVDERGQPVSPSTVTALVAA--RELNREIGATIIHNVITSRAVPELVAERGGTPLRSRVGHSYIKALMAETGAIFGGEHSAHYYFRDFWGADSGMLAALHVLAALGEQSRPLSELTADYQRYESSGEINFTVVDSSACVEAVLKSFGNRIVSIDHLDGVTVDLGDDSWFNLRSSNTEPLLRLNVEGRSVGDVDA----VVRQVSAEIAAQSAHAKAGP |
| 3PDK Chain:A ((23-467)) | --------GKYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKDTDRPKVIIGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDEQEAEIEALLDKEVDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVEEDFSGLH---IALDCAHGATSSLAPYLFADLEADISTMGT--SPNGMNINDGVGSTHPEVLAEL---VKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLKHNTVVSTVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKKPLSELAGEMTKFPQL-LVNVRVTDKKLALE------NEKIKEIIRV--VEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEVG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235450 for 3893 contacts (-60.5/contact) +
2D Compatibility (PS) -45779 + (NN) -19483 + (LL) 2260
1D Compatibility (HY) -26400 + (ID) 6450
Total energy: -331302.0 ( -85.10 by residue)
QMean score : 0.456
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