Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVFRRTVGAQWPILLVGSIFAVGFVLAGANFWR-RGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
1KVE Chain:? ((19-81))
WSLRWRMQKS----------TTIAAIAGCSGAATFGGLAGGIVGCIAAGILAILQGFEVNWHNGGGGDRSNPV-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20832 for 293 contacts (-71.1/contact) +
2D Compatibility (PS) -6587 + (NN) -2173 + (LL) 3004
1D Compatibility (HY) -800 + (ID) 650
Total energy: -28038.0 ( -95.69 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1KVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KVE-query.scw
PDB file :
Tito_Scwrl_1KVE.pdb
: