Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1DZT Chain:A ((9-174))
-------IPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPF--SQLPELSAKDAAAP---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94464 for 1266 contacts (-74.6/contact) +
2D Compatibility (PS) -17820 + (NN) -8267 + (LL) 2624
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -135227.0 ( -106.81 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_1DZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DZT-query.scw
PDB file :
Tito_Scwrl_1DZT.pdb
: