Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATEELTFESTSRFAEVDVDG--PLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRF-ALASTPESLTATRAMGKSFAGADFEAGM-MWREVYRL---RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGGR |
| 2PUJ Chain:A ((4-283)) | ------LTESSTSKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHL-------KNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVIDFL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155409 for 2478 contacts (-62.7/contact) +
2D Compatibility (PS) -29224 + (NN) -13738 + (LL) 796
1D Compatibility (HY) -24000 + (ID) 6300
Total energy: -227875.0 ( -91.96 by residue)
QMean score : 0.605
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