Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQIL----GHRAMIVAGGSNRTDTVNLALTVL------SGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGS-LDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
4CVH Chain:A ((7-250))-------VAAVLPAG--------PTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKE-HGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEFGTECLQLAL-KYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIK-


General information:
TITO was launched using:
RESULT:

Template: 4CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151673 for 1725 contacts (-87.9/contact) +
2D Compatibility (PS) -23620 + (NN) -14627 + (LL) 872
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -205798.0 ( -119.30 by residue)
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_4CVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CVH-query.scw
PDB file : Tito_Scwrl_4CVH.pdb: