Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------MPASSLGTGSPA-ADRLDATHERRREVI-------------------------------------------------------- |
| 1IF2 Chain:A ((3-251)) | AKPQPIAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAIAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKPEFRDIIDATR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2650 for 107 contacts (24.8/contact) +
2D Compatibility (PS) -3183 + (NN) -3137 + (LL) 0
1D Compatibility (HY) -400 + (ID) 350
Total energy: -4420.0 ( -41.31 by residue)
QMean score : 0.773
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