Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSASSPAAWRGTLAGLIAFH---IFII----IASNYLVQLP---------------------ITLFGWHTTWGAFSFP--FIFLATDLTVRLLGKGP-----ARLVIARVMIPALIA----SYVVSVLFQEAAFRGFSALLEFNTFVARISLASFLAYVL-------GQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFV--AFWRSDNPFM------AQHWVEIATVDYGVKLSISLLLFV--------PLYGMLLNGILKMLPGRPQSNA----------------------------------- |
| 4P5W Chain:A ((31-394)) | TKRADPAELRTIFLKYASIEKNGEFFMSPNDFVTRYLNIFSQPNPKTVELLSGVVDQTKDGLISFQEFVAFESVLCAPDALFMVAFQLFDKA-GKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERKRHLT-YAEFTQFLLEIQLEHAKQAFVQRDNARTGRVTAIDFRDIMVTIRPHVLTPFVEECLVAAAGGTTSHQVSFSYFNGFNSLLNNMELIRKIYSTLAGTRKDVEVTKEEFVLAAQKFGQVTPMEVDILFQLADLYEPRGRMTLADIERIAPPNPDHVGGYKLAVATFAGIENKFGLYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147351 for 1325 contacts (-111.2/contact) +
2D Compatibility (PS) -22147 + (NN) -6300 + (LL) 320
1D Compatibility (HY) -10000 + (ID) 1950
Total energy: -187428.0 ( -141.46 by residue)
QMean score : 0.195
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