Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
1LD3 Chain:A ((122-155))----------------------VQSYNKRAKEEAEKLGGLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGVSEYAVGWQSEGNTPDPW


General information:
TITO was launched using:
RESULT:

Template: 1LD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1756 for 138 contacts (-12.7/contact) +
2D Compatibility (PS) -3514 + (NN) 659 + (LL) 2476
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -5135.0 ( -37.21 by residue)
QMean score : 0.237

(partial model without unconserved sides chains):
PDB file : Tito_1LD3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LD3-query.scw
PDB file : Tito_Scwrl_1LD3.pdb: