Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCN-SAELREAYEACLPELSAYSTELGQNRALFEAYEALAKSPE----AAGFDVAQKTILEHALRDFRLSGI-DLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANYAELSLATKMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHAAASGINGVAWDAVELPSQFMENWCWEPEGLALISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHG-----DGRSVLQVLEGIRDEVAV--MRP-PAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVFNPDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA |
| 3CE2 Chain:A ((66-594)) | -----------------------------------------------SESLLSLLTTLFSIERKLNKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPA---LTSLSESLIAQHLSAPCLAPYRFYLEKIF----RLSIHTGTPGEEKILASAFTPLEVASKAFSSLSDS-------------E---IPFG--------Q-ATDSEGNSHPLSHALASLY-MQSTDRELRKTSYLAQCERYHSYR-----HTFANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNI-PTTVYTNLIDIVKKNS-SLITKYFS---IKQRCLNLKDFHFYDVYAPLSQ-------------EKKYTFQEAVDLIYTSL-SPLGTEYIDTL----------------KQGLTTQGWVDKYENLNKRSGAYSSGCYD---------SHP--YVLLNYTG---------TLYDVSVIAHEGGHSMHSYFSRKHQP-FHDA-QYPIFLAEIASTLNEMLLMDS-----MLKESDS----K-EEKITILTRCLDTIFSTLFRQVLFASFEYDIHHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFY---YNFYVYQYATGIIAALCFLEKILNNE---DNALNSYL-NFLKSGGSDFPLEIL-KKSGLDMGTVEPIQKAFCFIEKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176729 for 3970 contacts (-44.5/contact) +
2D Compatibility (PS) -53927 + (NN) -11982 + (LL) 13396
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -244892.0 ( -61.69 by residue)
QMean score : 0.403
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