Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGS--------LILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVGVLCSPMIPMVND--MELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
2A5H Chain:A ((114-292)) | -------------------------------------------------------------PDRVLLLITDMCSMYCRHCTRRRFAGQS--DDSMPME--------RIDKAIDYIRNT-PQVRDVLLSG-GDALLVSD---ETLEYIIAKLREIP-HVEIVRIGSRTPVVLPQRITP--ELVNMLKKYHPVWLNTHFNHPNE-----------ITEESTRACQLLADAGVPLGNQSV-LLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTYSEPINYTPGCNCDVCTGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87151 for 1246 contacts (-69.9/contact) +
2D Compatibility (PS) -18820 + (NN) -16654 + (LL) 4616
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -123809.0 ( -99.37 by residue)
QMean score : 0.376
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