Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASG-MRASQ-DELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWF-EQVESLLLSTLEPEAEVEAFEQAVAQLPAPPC--------GPRIEQSLIS------GNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVI--PLFPGIPG------------------------------------------------------------------------------- |
| 2BVL Chain:A ((1-543)) | MSLVNRKQLEKMANVRFRTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDICIDTYKKSGRNKALKKFKEYLVTEVLELKNNNLTPVEKNLHFVWIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDELNTYIEESLNKITQNSGNDVRNFGEFKNGESF--NLYEQELVERWNLAAASDILRISALKEIGGMYLDVDMLP-----GIQPDLF-----ESIEKPSSVTVDFWEMTKLEAIMKYKEYIPEYTSEHFDMLDEEVQSSFESVLASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVKDSYCSNLIVKQIENRYKILNNSLNPAISE-DNDFNTTTNTFIDSIMAE----ANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKRNYFEGAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54455 for 1266 contacts (-43.0/contact) +
2D Compatibility (PS) -21996 + (NN) -8553 + (LL) 812
1D Compatibility (HY) -12400 + (ID) 2200
Total energy: -98792.0 ( -78.03 by residue)
QMean score : 0.163
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