Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETD-EQLKIRVLNISKPE----LHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAE--VVVEEVEGNPGYYNSKFFLRPH-YQLEGLTVSLRLVSKLPSAKEA |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDK----QIRYEAGYRFVKGWRE--MVDTLHMPWRDEGVYLIT----------------GGAGSLGLLFAKEIANRTGRSTIVLT----GRSVLSEDKENELEALRSIG--AEVVY----------------READVSD---QHAVRHLLEEIKERY------GTLNGIIHGA---GSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDF-PL------DFFIFFSSVSGCL-------GNAGQADYAAANSFMDAFAEYRRSLAA-------------SKKRFGSTISFNWPLWEEGGMQVGAEDEKRMLKTTGMVPMPTDSGLKAFYQGIVSDKPQVFVMEGQLQKMKQKLL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17071 for 3518 contacts (4.9/contact) +
2D Compatibility (PS) -41965 + (NN) -3010 + (LL) 6152
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -37902.0 ( -10.77 by residue)
QMean score : 0.166
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