Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEVYANNMEISCKAANGKSIAAFPDVCFTPPQAPPTPLGVPIPYPNTGLSKDTTKGTRTIRITRKEV---MLKNKSYYKTSYGDEPGRAPKKGIVTSKIKGKVYFTSWSMNVKF-ESKNVVRHLDL-TTHNHASFPGNTPV-WPYLDQATVDAGGGPCSNEVKKEKKDCADFKPHGSKDACAGLGAGKPSGKKTSNEADRLADKVAARKCLTARRCALQPYKPNSCCPQQTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTHGLMHTFQSAAAAKSRSGTLQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKECLSAQLDNYHKQCGINARTPIKAVETGQTDVTAATQAIKTRNARLGATRSRVR |
| 4R03 Chain:A ((1-109)) | ----------------------------------------------GKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQY-NENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22115 for 613 contacts (36.1/contact) +
2D Compatibility (PS) -11315 + (NN) -4496 + (LL) 12892
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 17496.0 ( 28.54 by residue)
QMean score : 0.226
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