Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGARGQVFCMGSGDIHEEQLPDGDDAIGGRGNMRGVACI-DGVAYACGMDRQVYRRFDENDWRAIDTGARPP-AGSEAVVGFEAIGGFG-AREIYAVGWDGEIWQYDG--KRWQPRESPT-------NLILTAICC--AEDGSVYACGQAGTLLRGRN--DHWEIIAQD----DVDEDLWSLAWF-DGALYVSSA-TAVYTLVG--GHLKEVDFGDEQPQRCFHL-SAADGVLWSIAAKDIFSFDGQQWTRID |
| 3V9F Chain:A ((36-254)) | ------------------------------------------------------------------------------------------------------------NYVLSITQDKQGFLWFATEE-GLNKFDG-TRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVH---PGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121082 for 1348 contacts (-89.8/contact) +
2D Compatibility (PS) -20132 + (NN) -5034 + (LL) 6944
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -142654.0 ( -105.83 by residue)
QMean score : 0.291
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