Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAASP-EARRGFAAALGWLDWDQARPWVERLLASPEPLFRAIGLAACGMHRHDPGPALLSALGHADPAVLARAARTAGELRRRDLMANIRAYRAHDDPSLRFWANWATAQMGDEEALGPLRAFAGQPG-PFQLPATMVLLAWQPRDTSMAWIRQLMQAA--DTRRIGIQATGLFGDPVAVPWLIQQMRDES--LARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF |
| 1LRV Chain:A ((28-218)) | -------------------------------------------------------------------RCTPGDACVAVESGRQIDRFFRNN-PHLAVQYLADPFWERRAIAVRYSP-------VEALTPLIRDSDEVVRRAVAYRLP------REQLSALMFDEDREVRITVADRLP-------LEQLEQMAADRDYLVRAYVVQRIP-------PGRLFRFMRDEDRQVRKLVAKRLP-------E-ESLGLMTQDPEPEVRRIVASRLR-------GDDLLELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIAGRL------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70728 for 1383 contacts (-51.1/contact) +
2D Compatibility (PS) -18993 + (NN) -4162 + (LL) 14752
1D Compatibility (HY) -800 + (ID) 1300
Total energy: -81231.0 ( -58.74 by residue)
QMean score : 0.327
|
|
|