Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF
1R1G Chain:A ((2-30))
-----------------------------------------ACYSSDCRVCVAMGFSSGCINSCCY---
General information:
TITO was launched using:
RESULT:
Template:
1R1G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3266 for 117 contacts (-27.9/contact) +
2D Compatibility (PS) -2337 + (NN) 2904 + (LL) 4344
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -805.0 ( -6.88 by residue)
QMean score : 0.067
(partial model without unconserved sides chains):
PDB file :
Tito_1R1G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1G-query.scw
PDB file :
Tito_Scwrl_1R1G.pdb
: