Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MSGATRKPGFTVAVL---ATLLAAVVVLLGAYTRLTHAGLGCPDWPGCYGFVHVPLSEAQLAHAELHFPDAPVEAQKG------WNEMIHRYFA--GALGLL---ILGLALHALVRRGRDGQPLKLPLLLLAVVI-----AQAAFGMWTVTLKLWPQVVTAHLLGGFTTLALL---FLLALRLSGRFA---ARRYPAATRGLAGLALLLVIGQIALGGWVSSNYAAVACIDLPTCHGEWWPRMDFANGFHLTQHIGPNYLGGQLDSDARTAIHMTHRIGALCVTLVLLLLAWRLQRSGLVWPTALMLLGLSLQIGLGISNVLLHLPLPVAVAHNGGGALLLLSLVLVNYRLRAPASVRAPAPSPQRVRRTLPPAQGSRLKAA |
| 4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQMLEWRLGFWSQVKQHYG--VDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGV---GGRFRCS-----CYGSAPMHG-------FAIWFQVTFPGGESEKPLVLSTSPFHP--ATH------------------------WKQALLYLNEPVQVEQD-TDVS--------------GEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191131 for 2240 contacts (-85.3/contact) +
2D Compatibility (PS) -30360 + (NN) -2884 + (LL) 6576
1D Compatibility (HY) -8800 + (ID) 3250
Total energy: -229849.0 ( -102.61 by residue)
QMean score : 0.080
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