Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPACASSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDG-------DSYDLTPAGREDYKPESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQASLTTLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW |
3BDD Chain:A ((59-102)) | ------------------------------------------------------------------RAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREALITNPSAHHQAIKTSMNQILTVEESEQFLATLDKLLIGLQNLPI--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1378 for 180 contacts (-7.7/contact) +
2D Compatibility (PS) -3558 + (NN) 1687 + (LL) 7124
1D Compatibility (HY) -800 + (ID) 300
Total energy: 2775.0 ( 15.42 by residue)
QMean score : 0.425
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