Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFA----C-LGHDPWQTLHTVLVQPLS-DLYGLGELLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGSAVAIQLLDWQSRWALAWVL------LAGTAAGALWAGFAAWLRTRFN---ANEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQRSFLGFQVRVLGLDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGILCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLACDVLILYRPRLHGRWRKRPALRDALA |
| 3WO4 Chain:B ((1-301)) | -----GPESCTSR----------PHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIALHDCVLEF--------WPVELNDT--------GSYFFQMKNYTQKWKLNVIRRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKNPTIKKNAEFEDQ----GYYSCVHFLHHN-----GKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVEL--GKNVRLNCSALLNEED-----VIYWMFGEENGSDPNIHEEKEMRIMT--------PEGKWHASKVLRIENIGESNLNVLYNCTVASTGGTDTKSFILVRKAD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207313 for 1843 contacts (-112.5/contact) +
2D Compatibility (PS) -30168 + (NN) 8725 + (LL) 7872
1D Compatibility (HY) -6800 + (ID) 2500
Total energy: -230184.0 ( -124.90 by residue)
QMean score : -0.116
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