Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQ----EQ-G---------QWYF-------QR--YI---QHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 2V54 Chain:A ((2-187)) | ---------------------------------------------------------SRGALIVFEGLDKSGKTTQCMNIMESIPANTIKYL--NFPQRSTVTGKMIDDYLTRKKTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAKGA--SM------TLSKSYESGLP---KPDLVIFLESGSKEINRNVG---EEI--------Y--EDVTFQQKVLQEYKKMIEE---GDIHWQIISSEFEEDVKKELIKNIVIEAIHTVTGPVGQLWM----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38699 for 1129 contacts (-34.3/contact) +
2D Compatibility (PS) -17412 + (NN) -6674 + (LL) 7568
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -62867.0 ( -55.68 by residue)
QMean score : 0.410
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