Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETL----RKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDR--GIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFR-DAFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPP-EYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDD---MSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
| 4GXW Chain:A ((26-341)) | ----FHALPKVELHCHLLGAVRHDTFVALAQRSGAPIERAEIDAFYARGEKPVGVLHVLRALDRY-----LLTRPDDLRRIAYEYLEDAAAHNVRHAEFFWNP-TGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVDRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLHKVNPSEAWELMFSHFGFTIADLKQFMLNGIDGAWVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153842 for 2761 contacts (-55.7/contact) +
2D Compatibility (PS) -32782 + (NN) -10696 + (LL) 812
1D Compatibility (HY) -14800 + (ID) 4850
Total energy: -216158.0 ( -78.29 by residue)
QMean score : 0.441
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