Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
3NT5 Chain:A ((191-224))
----------------------------------------SVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCEIVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVE
General information:
TITO was launched using:
RESULT:
Template:
3NT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2224 for 138 contacts (-16.1/contact) +
2D Compatibility (PS) -3633 + (NN) -2467 + (LL) 3928
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -7796.0 ( -56.49 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_3NT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NT5-query.scw
PDB file :
Tito_Scwrl_3NT5.pdb
: