Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHLGLEAL-GGTLPLLLLG---VPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVFAWAPLHRLHHIRYGRAGDVNFALFFSVWD-RLLGTALHR-PDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQPPEGLGRSAGQA |
2I76 Chain:A ((4-259)) | -------------VLNFVGT--------------------GTLTRFFLECLKIGYILSRSIDRARNLAEVYGGKAATLEKHPEVVFVIVPDR---------------YIKTVANHLNLGDAVLVHCSGFLSSEIFKKSGRASIHPNFSFLEK----------ALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIKKMRVECSLTGPVKRGDWQVVEEERREYEKIF-GNTVLYDEIVKLLREVAESERR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104383 for 1690 contacts (-61.8/contact) +
2D Compatibility (PS) -24859 + (NN) 5261 + (LL) 5960
1D Compatibility (HY) 400 + (ID) 1200
Total energy: -118821.0 ( -70.31 by residue)
QMean score : 0.034
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