Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH
2JPP Chain:B ((1-52))
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHREEIYQRIQA--------
General information:
TITO was launched using:
RESULT:
Template:
2JPP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16334 for 231 contacts (-70.7/contact) +
2D Compatibility (PS) -6065 + (NN) -2276 + (LL) 160
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -34115.0 ( -147.68 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_2JPP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JPP-query.scw
PDB file :
Tito_Scwrl_2JPP.pdb
: