Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKTLFIATALLGSAAGVQAADNFVGLTWGETSNNIQKSKSLNRNLNSPNLDKVIDNTGTWGIRAGQQ-FEQGRYYATYENI-SDTSS------GNKLRQQNLLGSYDAFLPI-GDNNTKLFGGATLGLVKLEQDGKG--------FKRDSDVGYAAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
| 2F1V Chain:A ((3-191)) | ---------------------AGEFFMRAGSATVRPTEG--------------GFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDAS-SKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDP-WVFMFSAGYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 45122 for 1229 contacts (36.7/contact) +
2D Compatibility (PS) -16077 + (NN) 4582 + (LL) 2248
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 31375.0 ( 25.53 by residue)
QMean score : 0.032
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