Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS
2L5B Chain:A ((12-30))
-------------------------------------------------------------------------------------------LCAAAQVAALAAWLLGRRN
General information:
TITO was launched using:
RESULT:
Template:
2L5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5790 for 71 contacts (-81.5/contact) +
2D Compatibility (PS) -1920 + (NN) -895 + (LL) 6136
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -4469.0 ( -62.94 by residue)
QMean score : 0.020
(partial model without unconserved sides chains):
PDB file :
Tito_2L5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L5B-query.scw
PDB file :
Tito_Scwrl_2L5B.pdb
: