Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNVFSLLLAREARLLFRRPAELANPLVFFAIVIALFPLAVGPESQLLQTLSPGLVWVAALLAVLLSLEGLFRSDFEDGSMEQWVLSPHPLALLVLAKVLAHWLFSGLALVLMSPLFALMLGLP--ARCIPVLLLSLLLGTPVLSLLGAVGAALTVGLKRGGLLLALLILPLYIPVLILGSGALQASLQGLPSSGHLLWLASLTALALTLTPFAIAAGLKISVGE |
4UN1 Chain:B ((21-179)) | MSHQFS---PEEQAVLRIVQANLPDSLT--------------PYADLAEQAGMTEAQVLELLGRLKASGAIRRF----GASIKHQKTGWTHNAMVAWKVTPDQVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGRSEAECLGVVEDVKRTTS--------------------LKEHAILRSLKELKKTSMTYFT------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132301 for 981 contacts (-134.9/contact) +
2D Compatibility (PS) -16039 + (NN) 160 + (LL) 6520
1D Compatibility (HY) 2400 + (ID) 1600
Total energy: -140860.0 ( -143.59 by residue)
QMean score : 0.144
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