Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIAALDQGTTSTRVLVASQDGSADIQLALRHQ--QHHPQSGWVEHDPLEL----LANLQRCLEASG----RVDAIGLANQGESCMAWDARSGEPLSPLIVWQDNRTTPHIERLRASGAEALVLERSGLPLDAYFSASKLGWIVEHLPAARRALKAGRLRLGTSDAWFLDRLCG--TFATDVTTASRTALMNLAEGRWDPDLCALFGVPIECLPEIRDTVGHFGVIGNT------PLTASVVDQQASLYGHGCRQPGDAKITFGTGAFALTLSGERIIRSPETGLLATIAWQIDGKPVYAMDGGVYDASAAVEWAGRLGL---FSDFSELAGFDRPPAIERGLAFVPALSGLACPHWDRSAGAMWLGMDAGTRREDLCQALLEGVVLRSAEVIQAMDGYLKVTDR--LSIDGGLARSPYFAQFLADSLQRRIVTQRFDELTAFGCAALAARGLG-----HELAEPRNTRTEFQPRVDAGTARRWQVRFSEAVARTRGWR |
4E1J Chain:A ((28-516)) | --ILAIDQGTTSTRAIVF--DGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITANDIAAIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTFLIWRLTGGECFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCAADFGVTDPSLFGAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRS-KNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWL-RDGLKVI---TGSLAESADP---SQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLEAMHKDWR----TVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFAKSWARDRRFEPHMDEATRKVKLKGWRSAVKRTLIA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270835 for 4155 contacts (-65.2/contact) +
2D Compatibility (PS) -48258 + (NN) -26242 + (LL) 692
1D Compatibility (HY) -29600 + (ID) 8950
Total energy: -383193.0 ( -92.22 by residue)
QMean score : 0.516
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