Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA--PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQL-----EETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 3TQL Chain:A ((2-227)) | -------------------------------------------------------------------DTIKFATE-ATYPPYVYMG--GQVEGFGADIVKAVCKQMQAVCTISNQPWDSLIPSLKLGKFDALF-GGMNITTARQKEVDFTDPYYTNSVSFIADKNTPLTLSKQGLKGKIIGVQGGTTFDSYLQDSFG-NSITIQRYPSEEDALMDLTSGRVDAVVGDTPLIKQWLKQNGRREYVLIGKPVNDPNYFGKGVGIAVKKGNQALLLKLNKALAAIKANGVYAAIVQKYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137869 for 1717 contacts (-80.3/contact) +
2D Compatibility (PS) -23022 + (NN) -4316 + (LL) 6112
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -167495.0 ( -97.55 by residue)
QMean score : 0.408
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