Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIFNPNPGNTLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQKI
2G0U Chain:A ((17-86))
-----------YLTGIGRAFDDGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDIDSSILEHH
General information:
TITO was launched using:
RESULT:
Template:
2G0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4334 for 371 contacts (-11.7/contact) +
2D Compatibility (PS) -7302 + (NN) -3525 + (LL) -4
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -19615.0 ( -52.87 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_2G0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0U-query.scw
PDB file :
Tito_Scwrl_2G0U.pdb
: