Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGG----LRLLLGALVGW--------SVALAL-------QLPPLAQGVLVVQSSMPVAVFNYLYALRGNR--SPDQVASLVLCSTLLSFAFIPLLLTWWLPALR |
| 3Q87 Chain:A ((1-125)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKPFLLGLLKCKRCSFMTKLILECEKAESNDVDVKIFNKHMFTENGGERLKSLVNSLRDFHGRELSEQDISSFVENPGDDEKIKEFLFGIDVVEGSLRCDMCGLIYPIKGSIVETVDTVESK------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81429 for 652 contacts (-124.9/contact) +
2D Compatibility (PS) -10547 + (NN) -2065 + (LL) 17012
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -84229.0 ( -129.19 by residue)
QMean score : 0.045
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