Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDN---LELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3JUQ Chain:B ((28-183))
-------ENTSENRAQVAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGL--
General information:
TITO was launched using:
RESULT:
Template:
3JUQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34709 for 1001 contacts (-34.7/contact) +
2D Compatibility (PS) -16421 + (NN) -5918 + (LL) 812
1D Compatibility (HY) -13600 + (ID) 4050
Total energy: -73886.0 ( -73.81 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3JUQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUQ-query.scw
PDB file :
Tito_Scwrl_3JUQ.pdb
: