Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQ-VAKRAMTDTPDDRTGEASGLSKRQAFHRQHRQRAEEEARRLLDARAEQGGRWLDWVAGQLYLLRPPEYAAMVRRELQRLSGD---------------
1MK0 Chain:A ((1-97))
MKSGIYQIKNTLNNKVYVGSAKDFEKRWKRHFKDLEKGCHSSIKLQRSFNKHGNV----FECSILEEIPYEKDLIIERANFWIKELNSKINGYNIADATFG
General information:
TITO was launched using:
RESULT:
Template:
1MK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 30119 for 533 contacts (56.5/contact) +
2D Compatibility (PS) -8798 + (NN) -5710 + (LL) 412
1D Compatibility (HY) -1200 + (ID) 600
Total energy: 14223.0 ( 26.68 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1MK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MK0-query.scw
PDB file :
Tito_Scwrl_1MK0.pdb
: