Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MKFLLIGLIRFYQ-----YAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPWHPGGYDPVPERQEQACACHRTAKPGK
3EUJ Chain:B ((63-152))
DVQTQIVTAIQAELAHFRNTAQPINLGAVLQEQLARYPQSRHFDVARIIVDQAVKLGMASQDHQAVYPVWQPIDDFSAAVQA------HLIDQYDK
General information:
TITO was launched using:
RESULT:
Template:
3EUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23029 for 509 contacts (-45.2/contact) +
2D Compatibility (PS) -8419 + (NN) -2804 + (LL) 624
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -36578.0 ( -71.86 by residue)
QMean score : 0.065
(partial model without unconserved sides chains):
PDB file :
Tito_3EUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EUJ-query.scw
PDB file :
Tito_Scwrl_3EUJ.pdb
: