Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYAIAEDTLPARVLKELLLYRRRYPEHRQSASEADEIRRIEQVQLPRIAAFIEAGEPIEFVLPAFPAKSPNPGK-VLDSRPDMAERLSLSFLNHLCQRIQLFYAPGAKITVCSDGRVFGDLVRIGDAHISAYQDALRLMIEEIGATHIGVFNLEDVRAFEAQRDNHEQLRQLLIGGYAEPLESIRETLLASEEGLLLYRAITRFLYEDGLTPDYQGSKTALQRDAKERAYGVIQRSWAWGALLADQFPRAIRLSIHPQPADSLKFGIHMMPTRDDWLTPWHGVAVNTEDRFVLMKRSEVLELGGELVQINGQPSHYRLPARAARRAAVA |
| 3EBV Chain:A ((28-118)) | -------------------------------------------------------SAYDIIAVAFADATTTPGAVTFNLDSAGLGGY---TVDQFKADVRAKQAAGKKVIISVGGEKGTVS-VNSSASATNFANSVYSVMREYGFDGVDI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34030 for 544 contacts (-62.6/contact) +
2D Compatibility (PS) -9807 + (NN) -6033 + (LL) 19144
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -32476.0 ( -59.70 by residue)
QMean score : 0.475
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