Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS
3W8H Chain:B ((33-52))
---------------------------------------------GALEELENAFSLAEESCPGI------------
General information:
TITO was launched using:
RESULT:
Template:
3W8H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 289 for 73 contacts (4.0/contact) +
2D Compatibility (PS) -2232 + (NN) -1943 + (LL) 4244
1D Compatibility (HY) -800 + (ID) 300
Total energy: -742.0 ( -10.16 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3W8H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W8H-query.scw
PDB file :
Tito_Scwrl_3W8H.pdb
: