Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLDALVSQALEAVRHTEDVNALEQIRVHYLGKKGELTQVMKTLGDLPAEERPKVGALINVAKEKVQDVLNARKTELEGAALAARLAAERIDVTLPGRGQLSGGLHPVTRTLERIEQCFSRIGYEVAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYFNAN---------------MLLRTHTSPVQVRTMESQQPPIRIVCPGRVYRCD-SDLTHSPMFHQVEGLLVDEGVSFADLKGTIEEFLRAFFEKQLEVRFRPSFFPFTEPSAEVDIQCVICSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSNIDPEKF---------QGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLGQFR |
| 2AKW Chain:A ((1-263)) | ------------------------------------------------------------------------------------------RVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGA----QFAVWWPEGGK------WLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137699 for 1821 contacts (-75.6/contact) +
2D Compatibility (PS) -24854 + (NN) -4078 + (LL) 8760
1D Compatibility (HY) -26800 + (ID) 6350
Total energy: -191021.0 ( -104.90 by residue)
QMean score : 0.474
|
|
|