Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTAQEFRAGQVANINGAPWVIQKAEFNKSGRNAAVVKMKLKNLLTGAGTETVFKADDKLEPIILDRKEVTYSYFADPLYVFMDS-EFNQYEIEKDDLEGVLTFIEDGMTDICEAVFYNDKVISVELPTTIVRQIAYTEPAVRGDTSGKVMKTARLNNGAELQVSAFCEIGDSIEIDTRTGEYKSRVKA
1UEB Chain:A ((1-184))
MISVTDLRPGTKVKMDGGLWECVEYQHQKLGRGGAKVVAKFKNLETGATVERTFNSGEKLEDIYVETRELQYLYPEGEEMVFMDLETYEQFAVPRSRVVG-AEFFKEGM--TALGDMYEGQPIKVTPPTVVELKVVDTPPGVRGDTVSGGSKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYVGRA--
General information:
TITO was launched using:
RESULT:
Template:
1UEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71882 for 1275 contacts (-56.4/contact) +
2D Compatibility (PS) -19554 + (NN) 254 + (LL) 376
1D Compatibility (HY) -8400 + (ID) 3300
Total energy: -102506.0 ( -80.40 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1UEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEB-query.scw
PDB file :
Tito_Scwrl_1UEB.pdb
: