Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLSEPVRRCPRNGKRIAREPGDRPGTFRLIHPRWAGASVKRAVRACSSCVLLCHAHANPEGTHHVQQHPGARQLHHLPVEATEPGHRRRPARRAAGLFRRFLAHRRGTQRRPRYPAQLRLPLPLSREGTRMIKRIAQTAGFAGLLAALLLTLLQILWVTPLILEAETYEKSEPVAAQPHEHAPGVAAHVHDEEAWEPEDGWQRTLSTTGGNLVVAVGFALMLAGLFTLRAPGQTWQGLLWGLAGYAVFCLAPSLGLPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPLKLVGAVLLALPHLFGAPQPEVHASLAPEALAQRFVVASLVSNALFWAALGLAAAWLFRRNRGGVDA |
2JWA Chain:A ((41-84)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCPAEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQKIRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9581 for 155 contacts (-61.8/contact) +
2D Compatibility (PS) -4913 + (NN) -6107 + (LL) 22184
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -1217.0 ( -7.85 by residue)
QMean score : 0.059
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