Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRHPLAASRWRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEHLCRHQLPLAATREGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLRGRWLRQRDWPAYLASLAGPQTGQHWLHLSREHWLAPAMRRQDPLDPPRDGACWNIAFADEARPQMLVRVVPRDGYWVEAERLFLASDDWPPGLSLWGSARQAADA |
| 2WCW Chain:A ((7-59)) | -----------------------------------------------------------------------------KGTRFERDLLVELWKA-GFAAIRVAGAG---VSPFPCPDIVAGNGRTYLAIEV--KMRK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19583 for 288 contacts (-68.0/contact) +
2D Compatibility (PS) -5662 + (NN) -1602 + (LL) 16396
1D Compatibility (HY) -800 + (ID) 400
Total energy: -11651.0 ( -40.45 by residue)
QMean score : 0.114
|
|
|