Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQ--EKKTRAPIKNEADNGLLNERG-TLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL
2FU0 Chain:A ((9-157))
-----------------------------IIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCG-PNTNGSQFFITTVPCPWL-----DFKHTVFGKVTQGSKIVLDIEKVRTDKR----DKPLEDIKILNIK--
General information:
TITO was launched using:
RESULT:
Template:
2FU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63538 for 1117 contacts (-56.9/contact) +
2D Compatibility (PS) -15211 + (NN) -705 + (LL) 3456
1D Compatibility (HY) -9200 + (ID) 2750
Total energy: -87948.0 ( -78.74 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_2FU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FU0-query.scw
PDB file :
Tito_Scwrl_2FU0.pdb
: