Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRQNGTVKWFNDAKGFGFITPESGNDLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADEVQVV
1CSP Chain:A ((3-63))
-----EGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANV---
General information:
TITO was launched using:
RESULT:
Template:
1CSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28132 for 390 contacts (-72.1/contact) +
2D Compatibility (PS) -6468 + (NN) -2058 + (LL) 824
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -44084.0 ( -113.04 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_1CSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CSP-query.scw
PDB file :
Tito_Scwrl_1CSP.pdb
: