Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPIL---RIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRK---GQT---RIAHS-LELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
3RZG Chain:A ((33-204))
----------------------------------LEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERDLAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKI----
General information:
TITO was launched using:
RESULT:
Template:
3RZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43392 for 1097 contacts (-39.6/contact) +
2D Compatibility (PS) -16863 + (NN) -2383 + (LL) 2452
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -73986.0 ( -67.44 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3RZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RZG-query.scw
PDB file :
Tito_Scwrl_3RZG.pdb
: