Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRD-SRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
2FAE Chain:A ((3-77))
----IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA-
General information:
TITO was launched using:
RESULT:
Template:
2FAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32754 for 479 contacts (-68.4/contact) +
2D Compatibility (PS) -7776 + (NN) -4567 + (LL) 56
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -49391.0 ( -103.11 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_2FAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FAE-query.scw
PDB file :
Tito_Scwrl_2FAE.pdb
: