Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR
2OJL Chain:A ((7-85))
---HPPRIAIQYCTQCQWLLRAAWMAQELLSTFGADLGEVALVPGTGGVFRIHYNGAPLWDREVDGGFPEAKVLKQRVRDHL--------------
General information:
TITO was launched using:
RESULT:
Template:
2OJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11209 for 521 contacts (-21.5/contact) +
2D Compatibility (PS) -8545 + (NN) -6288 + (LL) 76
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -27016.0 ( -51.85 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_2OJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OJL-query.scw
PDB file :
Tito_Scwrl_2OJL.pdb
: