Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAHAEQSREIEDWFARLGTQVVRDWSGL---PLKKINNHSYWAAWSV-MSTAVVT-NRR----DLFDWAVSEFKVAA-NQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQ-VNGVDLRQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
| 3A0O Chain:A ((207-406)) | ---------------------------------------------------------------------------------------------EVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWDTKG-ATSRAYNDEAGFRVVVALAWGYDWLYD--HLS----EDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWA-E------GPHYWMTGMAYLIEAANLIRSYIGYDLYQ--RPFFQNTGRFPLYTKA--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84051 for 1451 contacts (-57.9/contact) +
2D Compatibility (PS) -20035 + (NN) -4634 + (LL) 10112
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -102758.0 ( -70.82 by residue)
QMean score : 0.424
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