Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSNRYPLPAQTGLVVAPGLPPKNSTLRPDQLNKRLSSAWHHLYDLCPELLKIDPPDGLTILRGFLQWAAEQKAAWNWAMHLRLYCWLLQSPFGAKVTDEHLEVLMDASAARWTVDDTSANRGILLASQGGAHITQDWKAPQAGAGTRVPLERLDLPAPNWTFAYCAVPDPRLREFPGWKPLPARGSLVG |
2OJ4 Chain:A ((16-30)) | ----------------------------------------------------LVHKYGLAVFQAFLR--------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2272 for 53 contacts (-42.9/contact) +
2D Compatibility (PS) -1390 + (NN) 223 + (LL) 10176
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 4137.0 ( 78.06 by residue)
QMean score : 0.401
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