Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALPDTHGMIGVGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQF-GTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYHGNNR-KPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLA--------ESPLFALDNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG |
| 4E5M Chain:A ((62-326)) | ------------------------------------------------------------LQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGQFRGW--QPRFYGTGLDNATVGFLGMGAIGLAMADRLQ-GWGATLQYHARKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERPINAVN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157442 for 1987 contacts (-79.2/contact) +
2D Compatibility (PS) -28214 + (NN) -15714 + (LL) 4760
1D Compatibility (HY) -20000 + (ID) 5150
Total energy: -221760.0 ( -111.61 by residue)
QMean score : 0.481
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